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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
Assay category
118
DNA binding
Target of assay
64
control
54
histone
54
histone modification
33
broad histone mark
21
narrow histone mark
Date released
47
August, 2017
23
May, 2020
21
November, 2017
9
October, 2019
8
August, 2021
8
October, 2017
1
February, 2021
1
May, 2021
Available data
3290
bam
bigWig
1703
bed narrowPeak
1542
tsv
1358
fastq
1017
bigBed narrowPeak
392
tagAlign
318
bed broadPeak
281
bigBed broadPeak
269
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
117
Homo sapiens
Biosample type
94
tissue
22
in vitro differentiated cells
1
cell line
1
primary cell
Organ
44
liver
36
brain
21
connective tissue
7
adipose tissue
5
pancreas
artery
2
blood vessel
2
epithelium
2
heart
2
musculature of body
2
vasculature
Project
118
AMP
Genome assembly (visualization)
1
GRCh38
Lab
118
AMP-T2D consortium
Audit category:
1
missing controlled_by
organ_slims!
artery
files.file_type!
bigWig
BIOSAMPLE
ASSAY
118 results
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Clear Filters
ChIP-seq
tissue
liver
43
brain
8
cingulate gyrus
8
subcutaneous abdominal adipose tissue
7
layer of hippocampus
4
+ See 15 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
7
pancreatic PP cell
1
cell line
iPSC derived cell line
1
primary cell
hepatocyte
1
See all biosamples
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