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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
Assay category
73
DNA binding
Target of assay
222
histone
histone modification
126
narrow histone mark
96
broad histone mark
65
control
8
transcription factor
Date released
23
May, 2020
11
November, 2017
10
August, 2017
9
October, 2019
8
February, 2021
7
August, 2021
3
May, 2021
2
October, 2017
Available data
2153
bam
1874
bigWig
1290
tsv
869
bed narrowPeak
787
fastq
586
bigBed narrowPeak
224
bed broadPeak
222
bigBed broadPeak
214
bed bed3+
161
txt
73
tagAlign
64
xls
26
bed bedMethyl
26
bigBed bedMethyl
18
bedpe bed3+
16
hic
11
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
vcf
Organism
72
Homo sapiens
Biosample type
52
tissue
12
in vitro differentiated cells
9
cell line
primary cell
Organ
27
liver
19
brain
6
artery
6
blood vessel
6
heart
6
vasculature
4
pancreas
3
connective tissue
epithelium
2
musculature of body
1
adipose tissue
Project
73
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
73
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
epithelium
biosample_type!
primary cell
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
tissue
liver
26
brain
2
caudate nucleus
2
cingulate gyrus
2
layer of hippocampus
2
+ See 15 more…
in vitro differentiated cells
neural progenitor cell
7
cardiomyocytes
3
adipocyte
2
cell line
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
HepG2
1
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