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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
ChIP-seq
Assay category
146
DNA binding
Target of assay
317
histone
317
histone modification
171
narrow histone mark
146
broad histone mark
66
control
8
transcription factor
Date released
45
August, 2017
44
May, 2021
41
November, 2017
10
October, 2017
6
August, 2021
Available data
385
bigWig
380
bed narrowPeak
334
bam
228
bigBed narrowPeak
146
tagAlign
95
fastq
34
bed broadPeak
14
bigBed broadPeak
11
bed bed3+
Organism
142
Homo sapiens
Biosample type
76
tissue
50
primary cell
14
in vitro differentiated cells
6
cell line
Organ
45
brain
18
liver
12
connective tissue
8
musculature of body
8
pancreas
4
adipose tissue
epithelium
Project
102
AMP
44
T1D
Genome assembly (visualization)
101
GRCh38
84
hg19
Lab
102
AMP-T2D consortium
44
Kyle Gaulton, UCSD
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
2
inconsistent assembly
organ_slims!
epithelium
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
146 results
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ChIP-seq
tissue
liver
11
brain
10
caudate nucleus
8
layer of hippocampus
8
skeletal muscle tissue
8
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primary cell
monocyte
44
skeletal muscle myoblast
6
in vitro differentiated cells
adipocyte
8
neural progenitor cell
6
cell line
HepG2
6
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