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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
ChIP-seq
Assay category
116
DNA binding
Target of assay
77
histone
77
histone modification
51
broad histone mark
39
control
26
narrow histone mark
Date released
60
November, 2017
27
August, 2017
9
October, 2019
8
August, 2021
8
October, 2017
3
February, 2021
1
May, 2021
Available data
298
bam
275
fastq
186
tsv
175
bed narrowPeak
157
txt
153
zippedFastqFolder
116
tagAlign
108
bigWig
75
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
16
bed bedMethyl
16
bigBed bedMethyl
7
csv
2
bedpe bed3+
1
hic
Organism
115
Homo sapiens
Biosample type
90
tissue
23
in vitro differentiated cells
3
cell line
Organ
75
brain
liver
21
connective tissue
7
adipose tissue
5
pancreas
2
artery
2
blood vessel
2
epithelium
2
heart
2
musculature of body
2
vasculature
Project
116
AMP
Genome assembly (visualization)
215
GRCh38
hg19
Lab
116
AMP-T2D consortium
Audit category:
1
missing controlled_by
organ_slims!
liver
assembly!
hg19
BIOSAMPLE
ASSAY
116 results
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ChIP-seq
tissue
caudate nucleus
14
layer of hippocampus
14
substantia nigra
14
cingulate gyrus
12
brain
8
+ See 14 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
8
pancreatic PP cell
1
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
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