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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
66
histone
66
histone modification
40
broad histone mark
26
narrow histone mark
9
control
Date released
57
August, 2017
11
November, 2017
7
October, 2017
Available data
bam
2506
bigWig
1563
bed narrowPeak
1183
tsv
951
bigBed narrowPeak
887
fastq
379
tagAlign
301
bed broadPeak
278
bigBed broadPeak
244
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
16
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
75
Homo sapiens
Biosample type
61
tissue
14
in vitro differentiated cells
Organ
22
connective tissue
20
liver
18
brain
15
musculature of body
pancreas
8
adipose tissue
Project
75
AMP
Genome assembly (visualization)
15
hg19
Lab
75
AMP-T2D consortium
Audit category:
1
missing controlled_by
organ_slims!
pancreas
files.file_type!
bam
BIOSAMPLE
ASSAY
75 results
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ChIP-seq
tissue
liver
20
skeletal muscle tissue
15
subcutaneous abdominal adipose tissue
8
brain
7
cingulate gyrus
6
+ See 3 more…
in vitro differentiated cells
adipocyte
14
See all biosamples
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