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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
22
ATAC-seq
7
DNase-seq
2
FAIRE-seq
Assay category
66
DNA binding
31
DNA accessibility
Target of assay
52
histone
52
histone modification
31
broad histone mark
21
narrow histone mark
11
transcription factor
6
RNA binding protein
3
control
Date released
40
October, 2018
27
August, 2017
14
September, 2018
October, 2019
5
September, 2017
4
June, 2019
3
May, 2021
3
November, 2018
1
May, 2019
Available data
675
bam
615
bigWig
471
fastq
417
tsv
207
bed narrowPeak
84
bigBed narrowPeak
80
zippedFastqFolder
27
bed bed3+
20
bed broadPeak
19
tagAlign
7
bedpe bed3+
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
bigBed broadPeak
6
txt
3
cool
1
bedpe
Organism
90
Homo sapiens
Biosample type
72
tissue
22
primary cell
3
in vitro differentiated cells
Organ
435
liver
156
brain
103
kidney
100
heart
97
pancreas
69
epithelium
62
musculature of body
56
vasculature
54
blood
54
bodily fluid
52
blood vessel
47
connective tissue
38
limb
18
ureter
17
adipose tissue
13
spleen
11
artery
6
eye
Project
97
AMP
Genome assembly (visualization)
90
hg19
84
GRCh38
Lab
97
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
month_released!
October, 2019
BIOSAMPLE
ASSAY
97 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
body of pancreas
26
4
pancreas
14
2
1
endocrine pancreas
14
islet of Langerhans
9
1
1
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
in vitro differentiated cells
pancreatic PP cell
3
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