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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
ChIP-seq
Assay category
105
DNA binding
Target of assay
73
histone
73
histone modification
47
narrow histone mark
31
control
26
broad histone mark
1
transcription factor
Date released
50
May, 2020
36
August, 2017
12
November, 2017
4
August, 2021
3
May, 2021
Available data
1370
bam
1245
bigWig
936
fastq
655
bed narrowPeak
591
tsv
449
bigBed narrowPeak
105
tagAlign
84
bed broadPeak
80
zippedFastqFolder
70
bigBed broadPeak
42
bed bed3+
9
bed bedMethyl
9
bedpe bed3+
9
bigBed bedMethyl
9
hic
6
txt
3
cool
3
tar
2
hdf5
1
bed bed3
1
bedpe
1
csv
1
vcf
Organism
98
Homo sapiens
Biosample type
86
tissue
12
cell line
4
primary cell
3
in vitro differentiated cells
Organ
118
brain
86
liver
22
connective tissue
19
pancreas
15
musculature of body
8
adipose tissue
7
epithelium
6
artery
6
blood vessel
6
heart
6
vasculature
1
pituitary gland
Project
105
AMP
Genome assembly (visualization)
56
hg19
39
GRCh38
Lab
105
AMP-T2D consortium
Audit category:
11
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
105 results
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Clear Filters
ChIP-seq
tissue
liver
70
islet of Langerhans
9
pancreas
7
cell line
HepG2
12
primary cell
hepatocyte
4
in vitro differentiated cells
pancreatic PP cell
3
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