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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
Assay category
11
DNA binding
Target of assay
227
histone
histone modification
142
narrow histone mark
85
broad histone mark
9
transcription factor
2
control
Date released
5
February, 2021
4
May, 2021
1
August, 2017
1
November, 2017
Available data
2271
bam
2234
bigWig
1402
tsv
835
bed narrowPeak
780
fastq
624
bigBed narrowPeak
233
bed broadPeak
232
bigBed broadPeak
225
bed bed3+
22
hic
21
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
11
tagAlign
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
ibed
1
bedpe
Organism
11
Homo sapiens
Biosample type
6
cell line
4
in vitro differentiated cells
1
primary cell
Organ
4
artery
4
blood vessel
4
heart
4
vasculature
1
epithelium
1
liver
1
pancreas
Project
11
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
cell line
smooth muscle cell of the coronary artery
4
HepG2
1
iPSC derived cell line
1
in vitro differentiated cells
cardiomyocytes
3
pancreatic PP cell
1
primary cell
skeletal muscle myoblast
1
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