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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
Assay category
102
DNA binding
Target of assay
237
histone
237
histone modification
135
narrow histone mark
102
broad histone mark
9
transcription factor
Date released
44
May, 2021
36
November, 2017
10
August, 2017
7
August, 2021
5
October, 2017
Available data
372
bam
371
bigWig
367
bed narrowPeak
242
bigBed narrowPeak
116
fastq
102
tagAlign
21
bed broadPeak
13
bigBed broadPeak
12
bed bed3+
Organism
98
Homo sapiens
Biosample type
51
primary cell
40
tissue
6
in vitro differentiated cells
5
cell line
Organ
36
brain
6
liver
4
pancreas
1
epithelium
Project
58
AMP
44
T1D
Genome assembly (visualization)
102
GRCh38
85
hg19
Lab
58
AMP-T2D consortium
44
Kyle Gaulton, UCSD
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent assembly
BIOSAMPLE
ASSAY
102 results
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ChIP-seq
primary cell
monocyte
44
skeletal muscle myoblast
6
hepatocyte
1
tissue
caudate nucleus
8
substantia nigra
8
layer of hippocampus
6
brain
5
cingulate gyrus
5
+ See 2 more…
in vitro differentiated cells
neural progenitor cell
6
cell line
HepG2
5
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