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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
222
ChIP-seq
Assay category
222
DNA binding
Target of assay
222
histone
222
histone modification
126
narrow histone mark
96
broad histone mark
65
control
5
transcription factor
Date released
67
November, 2017
63
August, 2017
40
October, 2019
27
May, 2020
13
August, 2021
12
October, 2017
May, 2021
Available data
636
bigWig
632
bed narrowPeak
579
bam
344
bigBed narrowPeak
222
tagAlign
156
fastq
49
bed broadPeak
22
bed bed3+
14
bigBed broadPeak
1
tagAlign bed3+
Organism
216
Homo sapiens
Biosample type
186
tissue
25
in vitro differentiated cells
primary cell
11
cell line
Organ
99
brain
55
liver
19
connective tissue
14
pancreas
13
musculature of body
7
adipose tissue
1
pituitary gland
Project
222
AMP
Genome assembly (visualization)
138
GRCh38
128
hg19
Lab
222
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
11
inconsistent control read length
1
inconsistent assembly
month_released!
May, 2021
biosample_type!
primary cell
BIOSAMPLE
ASSAY
222 results
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ChIP-seq
tissue
liver
44
substantia nigra
14
caudate nucleus
13
layer of hippocampus
13
skeletal muscle tissue
13
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in vitro differentiated cells
neural progenitor cell
13
adipocyte
12
cell line
HepG2
11
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