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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
169
ChIP-seq
Assay category
169
DNA binding
Target of assay
310
histone
310
histone modification
169
narrow histone mark
141
broad histone mark
68
control
9
transcription factor
Date released
41
May, 2021
40
October, 2019
29
August, 2017
27
May, 2020
21
November, 2017
9
August, 2021
2
October, 2017
Available data
409
bigWig
399
bed narrowPeak
389
bam
169
tagAlign
141
bigBed narrowPeak
94
fastq
24
bed broadPeak
12
bed bed3+
9
bigBed broadPeak
1
tagAlign bed3+
Organism
167
Homo sapiens
Biosample type
110
tissue
47
primary cell
12
in vitro differentiated cells
Organ
54
brain
35
liver
7
connective tissue
7
pancreas
5
musculature of body
3
adipose tissue
3
epithelium
1
pituitary gland
Project
129
AMP
40
T1D
Genome assembly (visualization)
137
hg19
131
GRCh38
Lab
129
AMP-T2D consortium
40
Kyle Gaulton, UCSD
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
169 results
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Clear Filters
ChIP-seq
tissue
liver
33
substantia nigra
6
caudate nucleus
5
cingulate gyrus
5
layer of hippocampus
5
+ See 43 more…
primary cell
monocyte
40
skeletal muscle myoblast
5
hepatocyte
2
in vitro differentiated cells
neural progenitor cell
7
adipocyte
4
pancreatic PP cell
1
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