Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
single cell RNA-seq
2
pCHi-C
Assay category
8
Transcription
Date released
6
February, 2021
2
March, 2020
1
November, 2018
1
September, 2018
Available data
433
bam
407
fastq
239
bigWig
200
tsv
185
bed narrowPeak
161
txt
153
zippedFastqFolder
152
tagAlign
44
bigBed narrowPeak
40
bed broadPeak
23
bedpe bed3+
22
hic
19
bed bedMethyl
19
bigBed bedMethyl
18
bigBed broadPeak
15
bed bed3+
10
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
0
tagAlign bed3+
Organism
10
Homo sapiens
Biosample type
6
tissue
2
in vitro differentiated cells
2
primary cell
Organ
5
kidney
1
liver
Project
10
AMP
Genome assembly (visualization)
3
hg19
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
5
audit script error
2
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
10 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
pCHi-C
tissue
kidney
5
liver
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
pancreatic cell
2
Download