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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
pCHi-C
Assay category
3
DNA binding
Target of assay
3
transcription factor
1
RNA binding protein
Date released
3
November, 2017
2
March, 2020
Available data
2783
bam
2556
bigWig
1522
bed narrowPeak
1330
tsv
949
fastq
933
bigBed narrowPeak
298
tagAlign
273
bed broadPeak
236
bed bed3+
236
bigBed broadPeak
161
txt
64
xls
26
bed bedMethyl
26
bigBed bedMethyl
19
bedpe bed3+
17
hic
11
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
tagAlign bed3+
1
vcf
Organism
5
Homo sapiens
Biosample type
3
cell line
2
in vitro differentiated cells
primary cell
Organ
3
liver
Project
5
AMP
Genome assembly (visualization)
5
hg19
Lab
5
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
primary cell
files.file_type!
tagAlign bed3+
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
pCHi-C
cell line
HepG2
3
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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