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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ChIP-seq
1
FAIRE-seq
Assay category
100
DNA binding
1
DNA accessibility
Target of assay
98
histone
98
histone modification
51
broad histone mark
47
narrow histone mark
2
control
Date released
84
May, 2021
12
August, 2017
4
August, 2021
1
October, 2019
Available data
613
bigWig
609
bam
409
fastq
295
bed narrowPeak
270
tsv
153
zippedFastqFolder
109
bigBed narrowPeak
100
tagAlign
49
bed broadPeak
49
bigBed broadPeak
37
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
2
csv
bed bed3
1
tar
Organism
101
Homo sapiens
Biosample type
238
tissue
101
primary cell
40
in vitro differentiated cells
23
cell line
Organ
5
epithelium
4
liver
1
blood vessel
1
vasculature
1
vein
Project
84
T1D
17
AMP
Genome assembly (visualization)
100
hg19
98
GRCh38
Lab
84
Kyle Gaulton, UCSD
17
AMP-T2D consortium
Audit category:
1
inconsistent assembly
files.file_type!
bed bed3
BIOSAMPLE
ASSAY
101 results
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ChIP-seq
FAIRE-seq
primary cell
monocyte
84
skeletal muscle myoblast
12
hepatocyte
4
endothelial cell of umbilical vein
1
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