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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
pCHi-C
Assay category
3
DNA binding
Target of assay
3
transcription factor
1
RNA binding protein
Date released
3
November, 2017
2
March, 2020
Available data
3075
bam
2828
bigWig
1626
bed narrowPeak
1444
tsv
1101
fastq
966
bigBed narrowPeak
391
tagAlign
300
bed broadPeak
263
bigBed broadPeak
252
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
5
Homo sapiens
Biosample type
3
cell line
2
in vitro differentiated cells
Organ
3
liver
1
blood vessel
epithelium
1
vasculature
1
vein
Project
5
AMP
Genome assembly (visualization)
5
hg19
Lab
5
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
epithelium
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
pCHi-C
cell line
HepG2
3
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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