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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ATAC-seq
6
WGBS
Assay category
1544
Transcription
14
DNA accessibility
6
DNA methylation
Date released
12
February, 2023
6
February, 2021
2
March, 2020
Available data
492
bed narrowPeak
407
bam
367
bigWig
241
bigBed narrowPeak
209
bed bed3+
208
bed broadPeak
206
bigBed broadPeak
123
fastq
101
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
20
Homo sapiens
Biosample type
18
primary cell
1
cell line
1
tissue
Organ
8
pancreas
7
epithelium
Project
14
AMP
6
HPAP
Genome assembly (visualization)
2
hg19
Lab
14
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
20 results
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ATAC-seq
WGBS
primary cell
pancreatic alpha cell
6
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
cell line
EndoC_BH1
1
tissue
islet of Langerhans
1
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