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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
single cell RNA-seq
72
total RNA-seq
3
pCHi-C
1
small RNA-seq
Assay category
73
Transcription
Date released
52
February, 2021
11
July, 2019
5
March, 2020
3
February, 2020
3
May, 2021
2
October, 2019
Available data
218
bigWig
205
bam
191
bed narrowPeak
94
bigBed narrowPeak
76
tsv
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
6
tagAlign
3
bedpe bed3+
3
hic
2
bed bedMethyl
2
bigBed bedMethyl
Organism
76
Homo sapiens
Biosample type
52
cell line
19
tissue
4
primary cell
1
in vitro differentiated cells
Organ
474
connective tissue
401
adipose tissue
331
pancreas
174
liver
80
epithelium
76
heart
62
blood vessel
62
vasculature
58
bone element
56
artery
23
brain
19
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
76
AMP
Genome assembly (visualization)
70
GRCh38
70
hg19
Lab
76
AMP-T2D consortium
assay_title!
WGBS
single cell RNA-seq
BIOSAMPLE
ASSAY
76 results
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total RNA-seq
pCHi-C
small RNA-seq
cell line
smooth muscle cell of the coronary artery
52
tissue
heart
4
1
heart left ventricle
3
1
right atrium auricular region
3
heart right ventricle
1
1
cardiac atrium
1
+ See 4 more…
primary cell
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
in vitro differentiated cells
cardiac fibroblast
1
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