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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
total RNA-seq
single cell RNA-seq
1
pCHi-C
Assay category
61
Transcription
Date released
52
February, 2021
5
July, 2019
3
February, 2020
2
March, 2020
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
62
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
62
Homo sapiens
Biosample type
52
cell line
8
tissue
2
primary cell
Organ
474
connective tissue
401
adipose tissue
343
pancreas
174
liver
86
epithelium
76
heart
62
blood vessel
62
vasculature
58
bone element
56
artery
23
brain
19
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
62
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
62
AMP-T2D consortium
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
62 results
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total RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
1
ascending aorta
2
thoracic aorta
2
coronary artery
1
tibial artery
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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