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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
total RNA-seq
3
RRBS
small RNA-seq
1
WGBS
1
pCHi-C
Assay category
6
Transcription
4
DNA methylation
Date released
4
July, 2019
3
March, 2020
2
August, 2017
2
February, 2020
Available data
66
bigWig
60
bed narrowPeak
55
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
7
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
11
Homo sapiens
Biosample type
9
tissue
2
primary cell
Organ
478
connective tissue
421
pancreas
400
adipose tissue
175
heart
174
liver
162
epithelium
70
vasculature
69
blood vessel
58
artery
58
bone element
27
kidney
24
brain
14
embryo
11
musculature of body
8
limb
6
eye
5
nerve
3
spleen
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
11
AMP
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
11
AMP-T2D consortium
assay_title!
small RNA-seq
BIOSAMPLE
ASSAY
11 results
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total RNA-seq
RRBS
WGBS
pCHi-C
tissue
psoas muscle
2
1
skeletal muscle tissue
1
2
gastrocnemius medialis
1
left ventricle myocardium
1
muscle of leg
1
primary cell
skeletal muscle cell
1
skeletal muscle satellite cell
1
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