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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1321
total RNA-seq
205
single cell RNA-seq
31
pCHi-C
26
ATAC-seq
18
small RNA-seq
WGBS
3
snDrop-seq
2
RNA microarray
Assay category
26
DNA accessibility
Date released
22
February, 2023
2
February, 2021
2
March, 2020
Available data
278
bed narrowPeak
175
bam
136
bigWig
64
xls
61
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Organism
26
Homo sapiens
Biosample type
13
primary cell
6
tissue
5
in vitro differentiated cells
2
cell line
Organ
6
connective tissue
4
bone element
4
skeleton
2
pancreas
1
brain
1
epithelium
1
liver
Project
26
AMP
Genome assembly (visualization)
14
hg19
2
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
1
inconsistent replicate
assay_title!
WGBS
BIOSAMPLE
ASSAY
26 results
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ATAC-seq
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
osteoblast
1
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
islet of Langerhans
1
+ See 1 more…
in vitro differentiated cells
chondrocyte
5
cell line
EndoC_BH1
1
HepG2
1
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