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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
13
ChIP-seq
4
total RNA-seq
2
small RNA-seq
Assay category
33
DNA accessibility
13
DNA binding
6
Transcription
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
Date released
41
June, 2019
5
May, 2019
4
July, 2019
2
March, 2020
Available data
53
bam
53
bigWig
46
bed narrowPeak
46
bigBed narrowPeak
33
bed bed3+
33
bed broadPeak
33
bigBed broadPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
41
tissue
11
primary cell
Organ
499
connective tissue
495
pancreas
488
liver
407
adipose tissue
221
epithelium
164
heart
140
vasculature
138
brain
136
blood vessel
115
kidney
87
limb
79
artery
58
bone element
54
blood
54
bodily fluid
52
musculature of body
30
nerve
18
ureter
14
embryo
13
spleen
12
vein
6
eye
1
pericardium
Project
52
AMP
Genome assembly (visualization)
53
hg19
52
GRCh38
Lab
52
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
52 results
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DNase-seq
ChIP-seq
total RNA-seq
small RNA-seq
tissue
muscle of leg
13
5
muscle of arm
17
psoas muscle
2
skeletal muscle tissue
1
1
forelimb muscle
1
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primary cell
skeletal muscle satellite cell
7
1
1
skeletal muscle cell
1
1
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