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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
single cell RNA-seq
20
total RNA-seq
3
pCHi-C
1
small RNA-seq
Assay category
113
Transcription
Date released
92
August, 2021
11
July, 2019
5
March, 2020
3
February, 2020
3
May, 2021
2
October, 2019
Available data
179
bed narrowPeak
168
bigWig
145
bam
116
tsv
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
3
bedpe bed3+
3
hic
Organism
116
Homo sapiens
Biosample type
111
tissue
cell line
4
primary cell
1
in vitro differentiated cells
Organ
478
connective tissue
401
adipose tissue
383
pancreas
159
liver
121
epithelium
116
heart
58
bone element
26
brain
18
kidney
16
blood vessel
16
vasculature
9
musculature of body
7
limb
6
artery
6
embryo
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
116
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
116
AMP-T2D consortium
biosample_type!
cell line
BIOSAMPLE
ASSAY
116 results
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single cell RNA-seq
total RNA-seq
pCHi-C
small RNA-seq
tissue
heart left ventricle
18
3
1
heart right ventricle
17
1
1
right cardiac atrium
18
1
left cardiac atrium
18
heart
4
1
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primary cell
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
in vitro differentiated cells
cardiac fibroblast
1
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