Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
total RNA-seq
6
single cell RNA-seq
1
pCHi-C
Assay category
16
Transcription
Date released
6
August, 2021
6
July, 2019
3
February, 2020
2
March, 2020
Available data
121
bed narrowPeak
120
bam
100
bigWig
83
bigBed narrowPeak
17
bed broadPeak
17
bigBed broadPeak
17
tsv
13
bed bed3+
6
fastq
3
bed bedMethyl
3
bigBed bedMethyl
3
hic
2
bedpe bed3+
2
hdf5
1
tar
Organism
17
Homo sapiens
Biosample type
cell line
14
tissue
3
primary cell
Organ
478
connective tissue
401
adipose tissue
383
pancreas
159
liver
121
epithelium
116
heart
58
bone element
26
brain
18
kidney
16
blood vessel
16
vasculature
9
musculature of body
7
limb
6
artery
6
embryo
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
17
AMP-T2D consortium
biosample_type!
cell line
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
pCHi-C
tissue
aorta
1
4
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
+ See 1 more…
primary cell
endothelial cell of coronary artery
1
pericardium fibroblast
1
smooth muscle cell of the coronary artery
1
See all biosamples
Download