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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
901
total RNA-seq
16
small RNA-seq
1
ATAC-seq
Assay category
917
Transcription
1
DNA accessibility
Date released
444
February, 2021
143
May, 2020
116
July, 2018
89
August, 2017
47
July, 2019
38
May, 2021
19
November, 2019
8
March, 2020
8
October, 2019
6
April, 2018
Available data
1648
bam
1647
bigWig
918
tsv
777
bed narrowPeak
493
bigBed narrowPeak
294
fastq
196
bed broadPeak
189
bed bed3+
160
bigBed broadPeak
105
tagAlign
11
hic
9
bed bedMethyl
9
bedpe bed3+
9
bigBed bedMethyl
5
bed bed3
1
bedpe
1
tagAlign bed3+
1
txt
Organism
918
Homo sapiens
Biosample type
918
tissue
252
primary cell
127
in vitro differentiated cells
105
cell line
Organ
454
connective tissue
396
adipose tissue
272
pancreas
152
liver
58
bone element
13
heart
9
brain
4
blood vessel
4
limb
4
musculature of body
4
nerve
4
vasculature
2
kidney
Project
918
AMP
Genome assembly (visualization)
918
hg19
917
GRCh38
Lab
918
AMP-T2D consortium
BIOSAMPLE
ASSAY
918 results
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total RNA-seq
small RNA-seq
ATAC-seq
tissue
adipose tissue
381
islet of Langerhans
266
1
liver
147
1
bone tissue
58
subcutaneous adipose tissue
6
1
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