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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
660
total RNA-seq
103
single cell RNA-seq
19
pCHi-C
14
small RNA-seq
3
snDrop-seq
2
RNA microarray
Assay category
777
Transcription
Date released
452
February, 2021
143
May, 2020
98
August, 2021
43
July, 2019
25
March, 2020
24
February, 2020
8
October, 2019
4
February, 2023
2
December, 2019
2
May, 2021
Available data
1478
bam
1359
bigWig
821
bed narrowPeak
801
tsv
499
bigBed narrowPeak
222
tagAlign
193
bed broadPeak
178
bed bed3+
170
bigBed broadPeak
164
fastq
151
txt
64
xls
19
bed bedMethyl
19
bigBed bedMethyl
8
hic
7
bedpe bed3+
6
csv
5
bed bed3
1
tagAlign bed3+
Organism
801
Homo sapiens
Biosample type
801
tissue
162
primary cell
131
in vitro differentiated cells
85
cell line
4
stem cell
Organ
457
connective tissue
399
adipose tissue
pancreas
154
liver
111
heart
58
bone element
23
brain
14
blood vessel
14
vasculature
12
kidney
7
limb
7
musculature of body
5
eye
5
nerve
4
artery
3
epithelium
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
801
AMP
Genome assembly (visualization)
646
GRCh38
646
hg19
Lab
801
AMP-T2D consortium
Audit category:
7
audit script error
3
inconsistent ontology term
organ_slims!
pancreas
BIOSAMPLE
ASSAY
801 results
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total RNA-seq
single cell RNA-seq
pCHi-C
small RNA-seq
snDrop-seq
RNA microarray
tissue
adipose tissue
381
1
liver
147
1
1
bone tissue
58
heart left ventricle
3
18
1
heart right ventricle
1
17
1
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