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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
total RNA-seq
6
single cell RNA-seq
1
pCHi-C
Assay category
67
Transcription
Date released
52
February, 2021
6
August, 2021
5
July, 2019
3
February, 2020
2
March, 2020
Available data
134
bam
114
bigWig
95
bed narrowPeak
68
tsv
46
bigBed narrowPeak
7
bed bed3+
bed broadPeak
7
bigBed broadPeak
6
tagAlign
3
fastq
2
bedpe bed3+
2
hdf5
2
hic
1
bed bedMethyl
1
bigBed bedMethyl
Organism
68
Homo sapiens
Biosample type
52
cell line
14
tissue
2
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
173
liver
166
heart
153
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
25
brain
18
kidney
14
embryo
9
musculature of body
5
eye
3
limb
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
68
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
68
AMP-T2D consortium
files.file_type!
bed broadPeak
month_released!
October, 2019
BIOSAMPLE
ASSAY
68 results
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total RNA-seq
single cell RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
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primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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