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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
2
pCHi-C
2
single cell RNA-seq
1
DNase-seq
Assay category
2
Transcription
1
DNA accessibility
Date released
2
December, 2019
2
March, 2020
1
August, 2017
Available data
164
bam
132
bed narrowPeak
132
bigWig
126
fastq
40
tagAlign
25
bed bed3+
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
4
tsv
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
5
Homo sapiens
Biosample type
358
tissue
169
primary cell
65
cell line
5
in vitro differentiated cells
4
stem cell
Organ
1
connective tissue
Project
5
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
5
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
2
audit script error
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
5 results
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pCHi-C
single cell RNA-seq
DNase-seq
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
2
adipocyte
1
embryonic stem cell
1
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