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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
39
ChIP-seq
2
DNase-seq
Assay category
39
DNA binding
2
DNA accessibility
Target of assay
37
histone
37
histone modification
22
broad histone mark
15
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
187
June, 2019
98
August, 2021
70
November, 2017
48
July, 2018
43
April, 2018
41
August, 2017
32
March, 2020
21
July, 2019
14
February, 2021
12
February, 2023
9
November, 2018
9
October, 2019
4
December, 2019
4
October, 2017
3
August, 2018
3
June, 2018
1
March, 2019
1
May, 2020
1
November, 2020
Available data
198
fastq
193
bam
183
bigWig
142
bed narrowPeak
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
0
tsv
Organism
35
Homo sapiens
Biosample type
26
tissue
14
primary cell
1
in vitro differentiated cells
Organ
13
musculature of body
12
pancreas
2
connective tissue
1
adipose tissue
Project
41
AMP
Genome assembly (visualization)
41
hg19
19
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
2
inconsistent assembly
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ChIP-seq
DNase-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
6
subcutaneous abdominal adipose tissue
1
primary cell
skeletal muscle myoblast
13
1
in vitro differentiated cells
adipocyte
1
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