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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
160
total RNA-seq
51
single cell RNA-seq
18
small RNA-seq
Assay category
229
Transcription
Target of assay
3
control
Date released
559
February, 2021
189
May, 2020
187
June, 2019
173
May, 2021
164
July, 2018
130
August, 2017
123
August, 2021
70
November, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
25
October, 2019
20
November, 2019
16
February, 2023
15
February, 2018
9
December, 2019
9
November, 2018
5
January, 2019
5
November, 2020
4
October, 2017
3
August, 2018
3
June, 2018
2
October, 2018
1
March, 2019
Available data
249
bigWig
246
bam
229
tsv
50
fastq
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
0
bed broadPeak
Organism
229
Homo sapiens
Biosample type
163
tissue
66
primary cell
Organ
157
pancreas
38
epithelium
18
connective tissue
12
adipose tissue
11
brain
11
heart
7
liver
6
kidney
5
blood vessel
5
vasculature
4
musculature of body
2
artery
1
pericardium
Project
229
AMP
Genome assembly (visualization)
229
GRCh38
229
hg19
Lab
229
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
229 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
islet of Langerhans
116
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
right lobe of liver
2
2
+ See 15 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 25 more…
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