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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
total RNA-seq
3
RRBS
2
small RNA-seq
1
WGBS
1
pCHi-C
Assay category
8
Transcription
4
DNA methylation
Date released
6
July, 2019
3
March, 2020
2
August, 2017
2
February, 2020
Available data
68
bigWig
60
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
13
Homo sapiens
Biosample type
10
tissue
3
primary cell
Organ
481
connective tissue
423
pancreas
403
adipose tissue
177
liver
176
heart
162
epithelium
70
vasculature
69
blood vessel
58
artery
58
bone element
28
brain
28
kidney
14
embryo
13
musculature of body
8
limb
6
eye
5
nerve
3
spleen
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
13
AMP
Genome assembly (visualization)
9
hg19
7
GRCh38
Lab
13
AMP-T2D consortium
BIOSAMPLE
ASSAY
13 results
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total RNA-seq
RRBS
small RNA-seq
WGBS
pCHi-C
tissue
skeletal muscle tissue
1
2
1
psoas muscle
2
1
gastrocnemius medialis
1
left ventricle myocardium
1
muscle of leg
1
primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
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