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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
total RNA-seq
6
single cell RNA-seq
1
RRBS
1
WGBS
1
pCHi-C
Assay category
67
Transcription
2
DNA methylation
Date released
52
February, 2021
7
July, 2019
6
August, 2021
3
February, 2020
2
March, 2020
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
70
Homo sapiens
Biosample type
52
cell line
15
tissue
3
primary cell
Organ
481
connective tissue
423
pancreas
403
adipose tissue
177
liver
176
heart
162
epithelium
70
vasculature
69
blood vessel
58
artery
58
bone element
28
brain
28
kidney
14
embryo
13
musculature of body
8
limb
6
eye
5
nerve
3
spleen
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
70
AMP
Genome assembly (visualization)
59
GRCh38
59
hg19
Lab
70
AMP-T2D consortium
BIOSAMPLE
ASSAY
70 results
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total RNA-seq
single cell RNA-seq
RRBS
WGBS
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
1
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
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primary cell
choroid plexus epithelial cell
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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