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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
545
total RNA-seq
27
snATAC-seq
17
single cell RNA-seq
6
WGBS
3
snDrop-seq
Assay category
562
Transcription
27
DNA accessibility
6
DNA methylation
Date released
598
February, 2021
324
November, 2017
287
August, 2017
189
May, 2020
173
May, 2021
164
July, 2018
123
August, 2021
94
December, 2017
92
February, 2023
88
November, 2018
73
September, 2018
65
July, 2019
60
October, 2018
49
April, 2018
45
March, 2020
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
24
May, 2022
20
November, 2019
17
October, 2017
16
October, 2019
11
September, 2017
9
December, 2019
7
August, 2020
5
January, 2018
4
August, 2018
4
November, 2020
3
June, 2018
1
March, 2019
Available data
572
bam
559
tsv
551
bigWig
89
txt
45
fastq
23
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
598
Homo sapiens
Biosample type
452
tissue
78
cell line
46
primary cell
22
in vitro differentiated cells
Organ
449
connective tissue
386
adipose tissue
58
bone element
52
artery
52
blood vessel
52
heart
52
vasculature
32
epithelium
32
pancreas
8
kidney
Project
553
AMP
45
HPAP
Genome assembly (visualization)
545
GRCh38
545
hg19
Lab
553
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
44
inconsistent ontology term
32
audit script error
BIOSAMPLE
ASSAY
598 results
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Clear Filters
total RNA-seq
snATAC-seq
single cell RNA-seq
WGBS
snDrop-seq
tissue
adipose tissue
381
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
+ See 3 more…
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
osteoblast
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
See all biosamples
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