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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
single cell RNA-seq
25
total RNA-seq
8
ChIP-seq
Assay category
123
Transcription
8
DNA binding
Target of assay
16
histone
histone modification
9
narrow histone mark
8
control
7
broad histone mark
Date released
567
February, 2021
212
May, 2020
178
May, 2021
164
July, 2018
131
August, 2021
100
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
25
October, 2019
20
November, 2019
16
February, 2023
15
February, 2018
11
November, 2017
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2017
2
October, 2018
Available data
123
tsv
87
bed narrowPeak
64
xls
57
txt
33
bam
28
bigWig
8
tagAlign
2
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
131
Homo sapiens
Biosample type
99
tissue
17
cell line
14
in vitro differentiated cells
1
primary cell
Organ
92
heart
10
liver
8
embryo
6
blood vessel
6
vasculature
2
artery
1
epithelium
1
pancreas
Project
131
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
121
AMP-T2D consortium
10
Bing Ren, UCSD
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
131 results
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single cell RNA-seq
total RNA-seq
ChIP-seq
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
+ See 9 more…
cell line
HepG2
9
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
7
7
primary cell
hepatocyte
1
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