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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
total RNA-seq
6
WGBS
1
whole genome sequencing assay
Assay category
106
Transcription
6
DNA methylation
1
DNA sequencing
Date released
51
May, 2021
45
May, 2020
11
August, 2021
6
February, 2021
Available data
270
bigWig
234
bed narrowPeak
205
bam
195
fastq
153
zippedFastqFolder
112
tsv
84
tagAlign
66
txt
64
xls
7
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
2
bed broadPeak
1
bedpe
1
vcf
Organism
113
Homo sapiens
Biosample type
102
primary cell
10
cell line
1
tissue
Organ
10
liver
7
pancreas
6
epithelium
Project
96
T1D
11
AMP
6
HPAP
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
AMP-T2D consortium
96
Kyle Gaulton, UCSD
11
Bing Ren, UCSD
6
Klaus Kaestner, Upenn
Audit category:
4
inconsistent ontology term
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
113 results
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total RNA-seq
WGBS
whole genome sequencing assay
primary cell
monocyte
53
pancreatic alpha cell
6
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
+ See 21 more…
cell line
HepG2
9
1
tissue
islet of Langerhans
1
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