Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1308
total RNA-seq
205
single cell RNA-seq
204
DNase-seq
53
ChIP-seq
33
pCHi-C
18
ATAC-seq
18
small RNA-seq
6
WGBS
5
Hi-C
3
snDrop-seq
2
Capture-C
2
RNA microarray
1
snATAC-seq
Assay category
18
DNA accessibility
Date released
16
February, 2023
2
March, 2020
Available data
278
bed narrowPeak
175
bam
136
bigWig
64
xls
61
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Organism
18
Homo sapiens
Biosample type
12
primary cell
4
in vitro differentiated cells
1
cell line
1
tissue
Organ
4
connective tissue
2
pancreas
1
epithelium
Project
18
AMP
Genome assembly (visualization)
6
hg19
Lab
18
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
month_released!
February, 2018
BIOSAMPLE
ASSAY
18 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
cell line
EndoC_BH1
1
tissue
islet of Langerhans
1
Download