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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
single cell RNA-seq
5
total RNA-seq
3
snDrop-seq
2
RNA microarray
2
pCHi-C
1
small RNA-seq
Assay category
11
Transcription
Date released
8
February, 2021
6
July, 2019
October, 2019
2
December, 2019
2
March, 2020
Available data
167
bed narrowPeak
116
bam
109
bigWig
103
bigBed narrowPeak
78
bed bed3+
78
bed broadPeak
78
bigBed broadPeak
64
xls
62
txt
18
tsv
5
csv
4
bed bedMethyl
4
bigBed bedMethyl
1
hic
Organism
18
Homo sapiens
Biosample type
12
tissue
4
primary cell
2
cell line
Organ
478
connective tissue
417
pancreas
401
adipose tissue
173
liver
166
heart
153
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
25
brain
18
kidney
14
embryo
9
musculature of body
5
eye
3
limb
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
18
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
18
AMP-T2D consortium
Audit category:
7
audit script error
2
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
18 results
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single cell RNA-seq
total RNA-seq
snDrop-seq
RNA microarray
pCHi-C
small RNA-seq
tissue
kidney
5
metanephros
1
1
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
+ See 2 more…
primary cell
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney epithelial cell
1
renal cortical epithelial cell
1
cell line
RCC 7860 VHL
1
RCC 7860 vector
1
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