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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
168
total RNA-seq
3
small RNA-seq
2
pCHi-C
Assay category
171
Transcription
Date released
144
May, 2020
9
August, 2021
7
July, 2019
5
December, 2019
5
January, 2019
2
March, 2020
1
February, 2020
October, 2019
Available data
674
bam
616
bigWig
465
fastq
435
bed narrowPeak
358
bigBed narrowPeak
173
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
13
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
173
Homo sapiens
Biosample type
153
tissue
15
cell line
5
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
173
liver
166
heart
153
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
25
brain
18
kidney
14
embryo
9
musculature of body
5
eye
3
limb
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
173
AMP
Genome assembly (visualization)
161
GRCh38
161
hg19
Lab
164
AMP-T2D consortium
9
Bing Ren, UCSD
month_released!
October, 2019
BIOSAMPLE
ASSAY
173 results
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total RNA-seq
small RNA-seq
pCHi-C
tissue
liver
146
1
1
right lobe of liver
3
2
cell line
HepG2
14
1
primary cell
hepatocyte
5
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