Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
total RNA-seq
98
single cell RNA-seq
Assay category
212
Transcription
Date released
559
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
123
August, 2021
89
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
331
bam
319
bigWig
287
fastq
248
bed narrowPeak
212
tsv
109
tagAlign
64
xls
57
txt
42
bigBed narrowPeak
41
bed broadPeak
38
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bedpe bed3+
2
hic
1
vcf
Organism
212
Homo sapiens
Biosample type
188
tissue
17
cell line
7
in vitro differentiated cells
Organ
92
heart
90
pancreas
9
liver
8
embryo
6
blood vessel
6
vasculature
2
artery
Project
212
AMP
Genome assembly (visualization)
104
GRCh38
104
hg19
Lab
202
AMP-T2D consortium
10
Bing Ren, UCSD
BIOSAMPLE
ASSAY
212 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
90
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
+ See 9 more…
cell line
HepG2
9
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
7
See all biosamples
Download