Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
single cell RNA-seq
141
total RNA-seq
Assay category
287
Transcription
Date released
559
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
123
August, 2021
89
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
287
tsv
213
bam
211
bigWig
106
bed narrowPeak
64
xls
57
txt
50
fastq
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
287
Homo sapiens
Biosample type
215
tissue
48
primary cell
17
cell line
7
in vitro differentiated cells
Organ
154
pancreas
92
heart
33
epithelium
9
liver
8
embryo
6
blood vessel
6
vasculature
2
artery
2
connective tissue
Project
287
AMP
Genome assembly (visualization)
179
GRCh38
179
hg19
Lab
277
AMP-T2D consortium
10
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
287 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
total RNA-seq
tissue
islet of Langerhans
117
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
+ See 9 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
cell line
HepG2
9
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
7
See all biosamples
Download