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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
570
total RNA-seq
103
single cell RNA-seq
6
WGBS
3
snDrop-seq
Assay category
673
Transcription
6
DNA methylation
Date released
559
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
123
August, 2021
89
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
682
tsv
621
bam
598
bigWig
146
txt
129
bed narrowPeak
64
xls
45
fastq
32
tagAlign
7
bed bed3+
6
csv
4
bed bedgraph
2
bed bed3
2
bedpe bed3+
2
hic
1
vcf
Organism
682
Homo sapiens
Biosample type
551
tissue
95
cell line
29
in vitro differentiated cells
7
primary cell
Organ
449
connective tissue
386
adipose tissue
144
heart
58
blood vessel
58
bone element
58
vasculature
54
artery
33
pancreas
32
epithelium
9
liver
8
embryo
8
kidney
Project
676
AMP
6
HPAP
Genome assembly (visualization)
560
GRCh38
560
hg19
Lab
666
AMP-T2D consortium
10
Bing Ren, UCSD
6
Klaus Kaestner, Upenn
Audit category:
44
inconsistent ontology term
5
audit script error
BIOSAMPLE
ASSAY
682 results
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Clear Filters
total RNA-seq
single cell RNA-seq
WGBS
snDrop-seq
tissue
adipose tissue
381
bone tissue
58
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
+ See 17 more…
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
HepG2
9
H1-hESC
8
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
neural progenitor cell
7
adipocyte
4
primary cell
pancreatic alpha cell
6
osteoblast
1
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