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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
686
total RNA-seq
151
single cell RNA-seq
6
WGBS
3
snDrop-seq
Assay category
837
Transcription
6
DNA methylation
Date released
559
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
123
August, 2021
89
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
846
tsv
785
bam
762
bigWig
146
txt
129
bed narrowPeak
95
fastq
64
xls
32
tagAlign
7
bed bed3+
6
csv
4
bed bedgraph
2
bed bed3
2
bedpe bed3+
2
hic
1
vcf
Organism
846
Homo sapiens
Biosample type
667
tissue
95
cell line
55
primary cell
29
in vitro differentiated cells
Organ
451
connective tissue
386
adipose tissue
186
pancreas
144
heart
65
epithelium
58
blood vessel
58
bone element
58
vasculature
54
artery
9
liver
8
embryo
8
kidney
Project
840
AMP
6
HPAP
Genome assembly (visualization)
724
GRCh38
724
hg19
Lab
830
AMP-T2D consortium
10
Bing Ren, UCSD
6
Klaus Kaestner, Upenn
Audit category:
50
inconsistent ontology term
5
audit script error
BIOSAMPLE
ASSAY
846 results
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Clear Filters
total RNA-seq
single cell RNA-seq
WGBS
snDrop-seq
tissue
adipose tissue
381
islet of Langerhans
117
bone tissue
58
heart left ventricle
18
left cardiac atrium
18
+ See 17 more…
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
HepG2
9
H1-hESC
8
primary cell
pancreatic alpha cell
7
6
pancreatic beta cell
9
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 11 more…
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
neural progenitor cell
7
adipocyte
4
See all biosamples
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