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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
192
total RNA-seq
12
ATAC-seq
1
pCHi-C
Assay category
192
Transcription
12
DNA accessibility
Date released
559
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
123
August, 2021
89
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
283
bam
263
bigWig
205
tsv
92
bed narrowPeak
76
fastq
50
tagAlign
10
bed bed3
7
txt
4
bed bed3+
3
bed bedgraph
Organism
205
Homo sapiens
Biosample type
147
tissue
57
primary cell
1
cell line
Organ
144
liver
4
eye
2
epithelium
Project
160
AMP
45
T1D
Genome assembly (visualization)
188
GRCh38
188
hg19
Lab
160
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
BIOSAMPLE
ASSAY
205 results
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total RNA-seq
ATAC-seq
pCHi-C
tissue
liver
143
pigmented layer of retina
2
retina
2
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
B cell
2
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cell line
HepG2
1
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