Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
pCHi-C
18
total RNA-seq
2
ATAC-seq
Assay category
18
Transcription
2
DNA accessibility
Date released
559
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
123
August, 2021
89
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
50
tsv
46
bam
46
bigWig
30
fastq
24
bed narrowPeak
21
bigBed narrowPeak
12
bedpe bed3+
10
hic
2
ibed
Organism
50
Homo sapiens
Biosample type
28
tissue
14
cell line
4
in vitro differentiated cells
4
stem cell
Organ
7
liver
6
pancreas
5
heart
3
epithelium
3
musculature of body
2
blood vessel
2
brain
2
connective tissue
2
intestine
2
kidney
2
vasculature
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
48
AMP
2
T1D
Genome assembly (visualization)
20
hg19
18
GRCh38
Lab
50
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
BIOSAMPLE
ASSAY
50 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
total RNA-seq
ATAC-seq
tissue
psoas muscle
1
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
liver
1
1
+ See 16 more…
cell line
HepG2
5
EndoC_BH1
2
1
early embryonic cell
2
MCF-7
1
RCC 7860 VHL
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
embryonic stem cell
1
lymphocyte of B lineage (iPSC)
1
stem cell
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
See all biosamples
Download