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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
total RNA-seq
3
small RNA-seq
2
WGBS
1
pCHi-C
Assay category
400
Transcription
2
DNA methylation
Date released
386
February, 2021
12
July, 2019
2
August, 2017
2
February, 2020
1
March, 2020
Available data
442
bam
425
bigWig
401
tsv
44
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
403
Homo sapiens
Biosample type
401
tissue
2
primary cell
Organ
481
connective tissue
423
pancreas
403
adipose tissue
177
liver
176
heart
162
epithelium
70
vasculature
69
blood vessel
58
artery
58
bone element
28
brain
28
kidney
14
embryo
13
musculature of body
8
limb
6
eye
5
nerve
3
spleen
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
403
AMP
Genome assembly (visualization)
400
GRCh38
398
hg19
Lab
403
AMP-T2D consortium
BIOSAMPLE
ASSAY
403 results
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total RNA-seq
small RNA-seq
WGBS
pCHi-C
tissue
adipose tissue
381
2
1
subcutaneous adipose tissue
7
1
omental fat pad
5
1
visceral abdominal adipose tissue
3
primary cell
mesenchymal stem cell of adipose
1
1
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