Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
25
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
Assay category
58
Transcription
49
DNA accessibility
25
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
64
February, 2021
35
February, 2023
21
October, 2019
3
July, 2019
3
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
102
bam
85
bigWig
74
bed narrowPeak
58
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
132
Homo sapiens
Biosample type
66
tissue
64
cell line
2
primary cell
Organ
631
pancreas
615
liver
553
connective tissue
414
adipose tissue
359
heart
307
epithelium
229
brain
207
kidney
201
vasculature
197
blood vessel
132
artery
99
limb
69
musculature of body
66
bone element
54
blood
54
bodily fluid
38
eye
32
nerve
28
embryo
18
ureter
15
spleen
13
vein
8
skeleton
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
132
AMP
Genome assembly (visualization)
128
GRCh38
93
hg19
Lab
132
AMP-T2D consortium
BIOSAMPLE
ASSAY
132 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery
1
36
3
2
tibial artery
1
1
18
2
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
52
8
4
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download