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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
4
DNase-seq
4
total RNA-seq
2
single cell RNA-seq
Assay category
21
DNA binding
6
Transcription
4
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
20
October, 2019
3
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
2
June, 2019
Available data
62
bed narrowPeak
36
bam
29
bigWig
25
bigBed narrowPeak
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
31
Homo sapiens
Biosample type
cell line
29
tissue
2
primary cell
Organ
506
connective tissue
467
pancreas
411
adipose tissue
224
liver
210
heart
196
epithelium
153
brain
121
kidney
99
vasculature
95
blood vessel
91
limb
58
bone element
56
musculature of body
31
artery
31
nerve
18
ureter
14
spleen
13
vein
11
eye
6
embryo
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
31
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
31
AMP-T2D consortium
biosample_type!
cell line
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
DNase-seq
total RNA-seq
single cell RNA-seq
tissue
tibial artery
18
2
1
coronary artery
3
2
1
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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