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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
total RNA-seq
4
small RNA-seq
3
pCHi-C
3
single cell RNA-seq
Assay category
23
Transcription
Target of assay
3
control
Date released
11
February, 2020
11
July, 2019
3
March, 2020
1
October, 2019
Available data
241
bam
220
bigWig
201
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
26
Homo sapiens
Biosample type
23
tissue
3
primary cell
Organ
477
connective tissue
401
adipose tissue
378
pancreas
174
liver
168
heart
120
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
25
brain
19
kidney
12
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
thymus
Project
26
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
26
AMP-T2D consortium
Audit category:
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inconsistent ontology term
BIOSAMPLE
ASSAY
26 results
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total RNA-seq
small RNA-seq
pCHi-C
single cell RNA-seq
tissue
frontal cortex
2
1
Ammon's horn
1
1
cerebellum
2
diencephalon
1
1
temporal lobe
1
1
+ See 12 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
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