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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
total RNA-seq
2
single cell RNA-seq
Assay category
72
Transcription
Date released
52
February, 2021
10
August, 2021
4
February, 2018
2
February, 2020
2
July, 2019
2
May, 2021
Available data
138
bam
114
bigWig
88
bed narrowPeak
72
tsv
27
fastq
25
bigBed narrowPeak
7
bed bed3+
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
Organism
72
Homo sapiens
Biosample type
60
cell line
6
in vitro differentiated cells
4
tissue
2
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
72
AMP
Genome assembly (visualization)
68
GRCh38
68
hg19
Lab
72
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
72 results
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total RNA-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
tissue
pulmonary artery
2
coronary artery
1
tibial artery
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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