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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
total RNA-seq
1
ATAC-seq
1
single cell RNA-seq
Assay category
35
Transcription
1
DNA accessibility
Date released
26
February, 2021
5
May, 2021
3
March, 2020
1
July, 2018
1
November, 2019
Available data
63
bam
57
bigWig
36
tsv
22
bed narrowPeak
5
bigBed narrowPeak
5
fastq
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bedpe bed3+
1
bigBed bedMethyl
1
bigBed broadPeak
1
hic
Organism
36
Homo sapiens
Biosample type
34
cell line
1
in vitro differentiated cells
1
primary cell
Organ
39
pancreas
36
epithelium
5
kidney
2
embryo
1
brain
1
connective tissue
1
stomach
1
urinary bladder
0
eye
Project
34
AMP
2
T1D
Genome assembly (visualization)
36
hg19
35
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
36
inconsistent ontology term
1
audit script error
BIOSAMPLE
ASSAY
36 results
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total RNA-seq
ATAC-seq
single cell RNA-seq
cell line
EndoC_BH1
33
1
in vitro differentiated cells
intermediate endothelial cell
1
primary cell
pancreatic acinar cell
1
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