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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
total RNA-seq
6
single cell RNA-seq
1
pCHi-C
Assay category
72
Transcription
Date released
52
February, 2021
6
August, 2021
5
July, 2019
4
February, 2020
4
October, 2019
2
March, 2020
Available data
222
bam
181
bigWig
156
bed narrowPeak
105
bigBed narrowPeak
73
tsv
15
bed broadPeak
15
bigBed broadPeak
13
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
73
Homo sapiens
Biosample type
52
cell line
19
tissue
2
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
73
AMP
Genome assembly (visualization)
62
GRCh38
62
hg19
Lab
73
AMP-T2D consortium
organ_slims!
esophagus
BIOSAMPLE
ASSAY
73 results
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total RNA-seq
single cell RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
1
tibial nerve
5
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
+ See 2 more…
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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